Computer Analyst, Biological Image Processing – Zallen Lab

Primary Work Address: 1275 York Avenue, New York, NY, 10021

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The Howard Hughes Medical Institute (HHMI) advances the discovery and sharing of scientific knowledge to benefit us all. As a biomedical research organization and philanthropy, HHMI supports a vibrant community of academic researchers, educators, students, and professionals. Together, we’re unlocking the fundamentals of biology and building an open, inclusive future for science. 

 

We are actively seeking a Computer Analyst to join the lab of Dr. Jennifer Zallen at Memorial Sloan Kettering Cancer Center in New York City, NY. This individual will work as part of a dedicated and multidisciplinary team of scientists working to understand how cells navigate through the body during development and how defects in these processes can lead to birth defects and cancer. We use computational, biophysical, and live-imaging approaches to visualize cell and protein dynamics in living embryos. The long-term goal of this research is to leverage this information to build, repair, and regenerate tissues to treat human disease. More information can be found at the following website: https://www.hhmi.org/scientists/jennifer-zallen  

 

About the Computer Analyst role: 
We are seeking an interactive, creative, and highly motivated researcher to assist in the design and implementation of custom automated and semi-automated computational tools to analyze cell behavior in living embryos. You will have an opportunity to participate in cutting-edge research and collaborate with a multidisciplinary team of scientists and you will receive ample guidance and mentorship to ensure your success in this role. 
 

What we provide: 

• A competitive compensation package with comprehensive health and wellness benefits 

• Joining the vibrant research community at Sloan Kettering 

• Hands-on training and ongoing skill-building in image analysis 

• Opportunities to work closely with an interactive multidisciplinary team of scientists and contribute to research publications 

• Career mentorship to foster professional growth and support in achieving your career goals 

 
What you’ll do: 

• Design and implement custom automated and semi-automated computational tools for image processing and analysis of 2D and 3D cell movements in time-lapse movies 

• Collaborate with senior scientists, postdoctoral researchers, and graduate students in an intellectually stimulating and interactive environment

• Design, implement, and validate metrics to analyze dynamic changes in cell shape and behavior over time 

• Assist in other computational efforts, such as improving pipelines and guiding lab members in the use of computational methods 

• Depending on interest, opportunities are available to participate in all aspects of the research, including confocal microscopy and time-lapse imaging 

 

What you bring: 

• Bachelor’s degree in computational biology, biology, mathematics, physics, engineering, or a related field or equivalent experience with biological image processing and analysis methods and programming

• Programming skills in Python and familiarity with open-source image analysis software and available tools such as ImageJ/Fiji

• Willingness to learn about deep learning frameworks and multi-dimensional image viewers such as Napari

• Excellent interpersonal, organizational, documentation, and communication skills 

• Enthusiasm for learning new approaches and a passion for teaching and helping others 

 

Application Instructions:  

Please include your GPA and a list of three professional references with contact information (names, phone numbers, and e-mail addresses) as part of your application. 

Physical Requirements

Remaining in a normal seated or standing position for extended periods of time; reaching and grasping by extending hand(s) or arm(s); dexterity to manipulate objects with fingers, for example using a keyboard; communication skills using the spoken word; ability to see and hear within normal parameters; ability to move about workspace. The position requires mobility, including the ability to move materials weighing up to several pounds (such as a laptop computer or tablet).

Persons with disabilities may be able to perform the essential duties of this position with reasonable accommodation. Requests for reasonable accommodation will be evaluated on an individual basis.

Please Note:

This job description sets forth the job’s principal duties, responsibilities, and requirements; it should not be construed as an exhaustive statement, however.  Unless they begin with the word “may,” the Essential Duties and Responsibilities described above are “essential functions” of the job, as defined by the Americans with Disabilities Act.

Compensation and Benefits

Our employees are compensated from a total rewards perspective in many ways for their contributions to our mission, including competitive pay, exceptional health benefits, retirement plans, time off, and a range of recognition and wellness programs. Visit our Benefits at HHMI site to learn more. 

Compensation Range

Pay Type:

HHMI’s salary structure is developed based on relevant job market data. HHMI considers a candidate’s education, previous experiences, knowledge, skills and abilities, as well as internal equity when making job offers. Typically, a new hire for this position in this location is compensated between the minimum and the midpoint of the salary range.

HHMI is an Equal Opportunity Employer