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Genomic imprinting is an epigenetic phenomenon giving rise to parent-of-origin allele specific expression that occurs mainly in placental tissue/endosperm in animals and plants and is hypothesized to be involved in the allocation of nutrient resources to the growing embryo. Although imprinting has evolved independently in plant and animal lineages, similar epigenetic mechanisms, including DNA methylation, histone tail modification, and sRNA-guided silencing mechanisms are conserved. In plants, genomic imprinting is hypothesized to be established in the gametes and reflected in parent-of-origin allele specific expression in the endosperm after fertilization [Hornslien et al. Plant Physiol. 2019].
Using temporal and spatial endosperm specific GFP markers and fluorescence-assisted nuclear sorting to study endosperm expression by allele-specific transcript profiling, we have shown that imprinting patterns can be established late in endosperm development and in specific domains, challenging the current hypothesis [van Ekelenburg et al. Plant Physiol. 2023]. These findings are supported by experimental evidence from hybridization crosses between different Arabidopsis species: Here, a parental-specific expression can be reversed by fertilization by a different species, suggesting a dynamic regulation mechanism that can act after fertilization [Bjerkan et al., Plant J. 2020]. We have established that using different species in hybrid crosses leads to diametrically opposite phenotypic consequences in the endosperm, thus allowing association of imprinting patterns to a phenotype [Bjerkan et al., Front. Plant Sci. 2023].
For more information and how to apply: https://www.jobbnorge.no/en/available-jobs/job/257250/phd-research-fellow-in-plant-reproduction-and-developmental-biology
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